Software

Below we list software and resources that either have been built by or are being used regularly by the Wall lab.

Roundup : Large-scale database of orthology covering over 220 publicly available genomes. The orthologs are computed using the Reciprocal Smallest Distance (RSD) algorithm.

Reciprocal Smallest Distance (RSD) : Software used in Roundup to calculate orthologs and associated evolutionary distances between two genomes.

AutWorks: View and search through the network of genes implicated in Autism Spectrum Disorder and related neurological diseases.

Phylomonography: Web system for dynamic navigation through the phylogeny of the tropical moss Mitthyridium.

Nextbio @ Harvard: Harvard enterprise site (restricted to Harvard). NextBio is a life science search engine that enables researchers and clinicians to access and understand the world's life sciences information

Transfac @ Harvard: Harvard access only

SFARI gene: A publicly available web-portal for genes associated with Autism Spectrum Disorder based on published literature.

GeneProspector (HuGENavigator): Gene Prospector is a bioinformatics tool designed to sort, rank, and display information about genes in relation to human diseases, risk factors and other phenotypes.

Nextbio: NextBio is a life science search engine that enables researchers and clinicians to access and understand the world's life sciences information